RT Journal
A1 Ramilowski, Jordan A.
A1 Yip, Chi Wai
A1 Agrawal, Saumya
A1 Chang, Jen-Chien
A1 Ciani, Yari
A1 Kulakovskiy, Ivan V.
A1 Mendez, Mickaël
A1 Ooi, Jasmine Li Ching
A1 Ouyang, John F.
A1 Parkinson, Nick
A1 Petri, Andreas
A1 Roos, Leonie
A1 Severin, Jessica
A1 Yasuzawa, Kayoko
A1 Abugessaisa, Imad
A1 Akalin, Altuna
A1 Antonov, Ivan V.
A1 Arner, Erik
A1 Bonetti, Alessandro
A1 Bono, Hidemasa
A1 Borsari, Beatrice
A1 Brombacher, Frank
A1 Cameron, Christopher J.F.
A1 Cannistraci, Carlo Vittorio
A1 Cardenas, Ryan
A1 Cardon, Melissa
A1 Chang, Howard
A1 Dostie, Josée
A1 Ducoli, Luca
A1 Favorov, Alexander
A1 Fort, Alexandre
A1 Garrido, Diego
A1 Gil, Noa
A1 Gimenez, Juliette
A1 Guler, Reto
A1 Handoko, Lusy
A1 Harshbarger, Jayson
A1 Hasegawa, Akira
A1 Hasegawa, Yuki
A1 Hashimoto, Kosuke
A1 Hayatsu, Norihito
A1 Heutink, Peter
A1 Hirose, Tetsuro
A1 Imada, Eddie L.
A1 Itoh, Masayoshi
A1 Kaczkowski, Bogumil
A1 Kanhere, Aditi
A1 Kawabata, Emily
A1 Kawaji, Hideya
A1 Kawashima, Tsugumi
A1 Kelly, S. Thomas
A1 Kojima, Miki
A1 Kondo, Naoto
A1 Koseki, Haruhiko
A1 Kouno, Tsukasa
A1 Kratz, Anton
A1 Kurowska-Stolarska, Mariola
A1 Kwon, Andrew Tae Jun
A1 Leek, Jeffrey
A1 Lennartsson, Andreas
A1 Lizio, Marina
A1 López-Redondo, Fernando
A1 Luginbühl, Joachim
A1 Maeda, Shiori
A1 Makeev, Vsevolod J.
A1 Marchionni, Luigi
A1 Medvedeva, Yulia A.
A1 Minoda, Aki
A1 Müller, Ferenc
A1 Muñoz-Aguirre, Manuel
A1 Murata, Mitsuyoshi
A1 Nishiyori, Hiromi
A1 Nitta, Kazuhiro R.
A1 Noguchi, Shuhei
A1 Noro, Yukihiko
A1 Nurtdinov, Ramil
A1 Okazaki, Yasushi
A1 Orlando, Valerio
A1 Paquette, Denis
A1 Parr, Callum J.C.
A1 Rackham, Owen J.L.
A1 Rizzu, Patrizia
A1 Sánchez Martinez, Diego Fernando
A1 Sandelin, Albin
A1 Sanjana, Pillay
A1 Semple, Colin A.M.
A1 Shibayama, Youtaro
A1 Sivaraman, Divya M.
A1 Suzuki, Takahiro
A1 Szumowski, Suzannah C.
A1 Tagami, Michihira
A1 Taylor, Martin S.
A1 Terao, Chikashi
A1 Thodberg, Malte
A1 Thongjuea, Supat
A1 Tripathi, Vidisha
A1 Ulitsky, Igor
A1 Verardo, Roberto
A1 Vorontsov, Ilya E.
A1 Yamamoto, Chinatsu
A1 Young, Robert S.
A1 Baillie, J. Kenneth
A1 Forrest, Alistair R.R.
A1 Guigó, Roderic
A1 Hoffman, Michael M.
A1 Hon, Chung Chau
A1 Kasukawa, Takeya
A1 Kauppinen, Sakari
A1 Kere, Juha
A1 Lenhard, Boris
A1 Schneider, Claudio
A1 Suzuki, Harukazu
A1 Yagi, Ken
A1 de Hoon, Michiel J.L.
A1 Shin, Jay W.
A1 Carninci, Piero
T1 Functional annotation of human long noncoding RNAs via molecular phenotyping
JF Genome Research 
JO Genome Research 
YR 2020 
FD July 01 
VO 30 
IS 7 
SP 1060 
OP 1072 
DO 10.1101/gr.254219.119 
UL http://genome.cshlp.org/content/30/7/1060.abstract 
AB Long noncoding RNAs (lncRNAs) constitute the majority of transcripts in the mammalian genomes, and yet, their functions remain largely unknown. As part of the FANTOM6 project, we systematically knocked down the expression of 285 lncRNAs in human dermal fibroblasts and quantified cellular growth, morphological changes, and transcriptomic responses using Capped Analysis of Gene Expression (CAGE). Antisense oligonucleotides targeting the same lncRNAs exhibited global concordance, and the molecular phenotype, measured by CAGE, recapitulated the observed cellular phenotypes while providing additional insights on the affected genes and pathways. Here, we disseminate the largest-to-date lncRNA knockdown data set with molecular phenotyping (over 1000 CAGE deep-sequencing libraries) for further exploration and highlight functional roles for ZNF213-AS1 and lnc-KHDC3L-2.