TY - JOUR A1 - Blanchard, Zannel A1 - Vahrenkamp, Jeffery M. A1 - Berrett, Kristofer C. A1 - Arnesen, Spencer A1 - Gertz, Jason T1 - Estrogen-independent molecular actions of mutant estrogen receptor 1 in endometrial cancer Y1 - 2019/09/01 JF - Genome Research JO - Genome Research SP - 1429 EP - 1441 DO - 10.1101/gr.244780.118 VL - 29 IS - 9 UR - http://genome.cshlp.org/content/29/9/1429.abstract N2 - Estrogen receptor 1 (ESR1) mutations have been identified in hormone therapy–resistant breast cancer and primary endometrial cancer. Analyses in breast cancer suggest that mutant ESR1 exhibits estrogen-independent activity. In endometrial cancer, ESR1 mutations are associated with worse outcomes and less obesity, however, experimental investigation of these mutations has not been performed. Using a unique CRISPR/Cas9 strategy, we introduced the D538G mutation, a common endometrial cancer mutation that alters the ligand binding domain of ESR1, while epitope tagging the endogenous locus. We discovered estrogen-independent mutant ESR1 genomic binding that is significantly altered from wild-type ESR1. The D538G mutation impacted expression, including a large set of nonestrogen-regulated genes, and chromatin accessibility, with most affected loci bound by mutant ESR1. Mutant ESR1 is distinct from constitutive ESR1 activity because mutant-specific changes are not recapitulated with prolonged estrogen exposure. Overall, the D538G mutant ESR1 confers estrogen-independent activity while causing additional regulatory changes in endometrial cancer cells that are distinct from breast cancer cells. ER -