TY - JOUR A1 - Cleal, Kez A1 - Jones, Rhiannon E. A1 - Grimstead, Julia W. A1 - Hendrickson, Eric A. A1 - Baird, Duncan M. T1 - Chromothripsis during telomere crisis is independent of NHEJ, and consistent with a replicative origin Y1 - 2019/05/01 JF - Genome Research JO - Genome Research SP - 737 EP - 749 DO - 10.1101/gr.240705.118 VL - 29 IS - 5 UR - http://genome.cshlp.org/content/29/5/737.abstract N2 - Telomere erosion, dysfunction, and fusion can lead to a state of cellular crisis characterized by large-scale genome instability. We investigated the impact of a telomere-driven crisis on the structural integrity of the genome by undertaking whole-genome sequence analyses of clonal populations of cells that had escaped crisis. Quantification of large-scale structural variants revealed patterns of rearrangement consistent with chromothripsis but formed in the absence of functional nonhomologous end-joining pathways. Rearrangements frequently consisted of short fragments with complex mutational patterns, with a repair topology that deviated from randomness showing preferential repair to local regions or exchange between specific loci. We find evidence of telomere involvement with an enrichment of fold-back inversions demarcating clusters of rearrangements. Our data suggest that chromothriptic rearrangements caused by a telomere crisis arise via a replicative repair process involving template switching. ER -