RT Journal A1 Liu, Denghui A1 Wang, Xinyi A1 He, Dajian A1 Sun, Chunli A1 He, Xiechao A1 Yan, Lanzhen A1 Li, Yizhou A1 Han, Jing-Dong J. A1 Zheng, Ping T1 Single-cell RNA-sequencing reveals the existence of naive and primed pluripotency in pre-implantation rhesus monkey embryos JF Genome Research JO Genome Research YR 2018 FD October 01 VO 28 IS 10 SP 1481 OP 1493 DO 10.1101/gr.233437.117 UL http://genome.cshlp.org/content/28/10/1481.abstract AB Naive pluripotency exists in epiblast cells of mouse pre-implantation embryos. However, whether the naive pluripotency is transient or nonexistent in primate embryos remains unclear. Using RNA-seq in single blastomeres from 16-cell embryos through to hatched blastocysts of rhesus monkey, we constructed the lineage segregation roadmap in which the specification of trophectoderm, epiblast, and primitive endoderm is initiated simultaneously at the early blastocyst stage. Importantly, we uncovered the existence of distinct pluripotent states in monkey pre-implantation embryos. At the early- and middle-blastocyst stages, the epiblast cells have the transcriptome features of naive pluripotency, whereas they display a continuum of primed pluripotency characteristics at the late and hatched blastocyst stages. Moreover, we identified potential regulators that might play roles in the transition from naive to primed pluripotency. Thus, our study suggests the transient existence of naive pluripotency in primates and proposes an ideal time window for derivation of primate embryonic stem cells with naive pluripotency.