TY - JOUR A1 - Shao, Changwei A1 - Li, Qiye A1 - Chen, Songlin A1 - Zhang, Pei A1 - Lian, Jinmin A1 - Hu, Qiaomu A1 - Sun, Bing A1 - Jin, Lijun A1 - Liu, Shanshan A1 - Wang, Zongji A1 - Zhao, Hongmei A1 - Jin, Zonghui A1 - Liang, Zhuo A1 - Li, Yangzhen A1 - Zheng, Qiumei A1 - Zhang, Yong A1 - Wang, Jun A1 - Zhang, Guojie T1 - Epigenetic modification and inheritance in sexual reversal of fish Y1 - 2014/04/01 JF - Genome Research JO - Genome Research SP - 604 EP - 615 DO - 10.1101/gr.162172.113 VL - 24 IS - 4 UR - http://genome.cshlp.org/content/24/4/604.abstract N2 - Environmental sex determination (ESD) occurs in divergent, phylogenetically unrelated taxa, and in some species, co-occurs with genetic sex determination (GSD) mechanisms. Although epigenetic regulation in response to environmental effects has long been proposed to be associated with ESD, a systemic analysis on epigenetic regulation of ESD is still lacking. Using half-smooth tongue sole (Cynoglossus semilaevis) as a model—a marine fish that has both ZW chromosomal GSD and temperature-dependent ESD—we investigated the role of DNA methylation in transition from GSD to ESD. Comparative analysis of the gonadal DNA methylomes of pseudomale, female, and normal male fish revealed that genes in the sex determination pathways are the major targets of substantial methylation modification during sexual reversal. Methylation modification in pseudomales is globally inherited in their ZW offspring, which can naturally develop into pseudomales without temperature incubation. Transcriptome analysis revealed that dosage compensation occurs in a restricted, methylated cytosine enriched Z chromosomal region in pseudomale testes, achieving equal expression level in normal male testes. In contrast, female-specific W chromosomal genes are suppressed in pseudomales by methylation regulation. We conclude that epigenetic regulation plays multiple crucial roles in sexual reversal of tongue sole fish. We also offer the first clues on the mechanisms behind gene dosage balancing in an organism that undergoes sexual reversal. Finally, we suggest a causal link between the bias sex chromosome assortment in the offspring of a pseudomale family and the transgenerational epigenetic inheritance of sexual reversal in tongue sole fish. ER -