RT Journal A1 Spieler, Derek A1 Kaffe, Maria A1 Knauf, Franziska A1 Bessa, José A1 Tena, Juan J. A1 Giesert, Florian A1 Schormair, Barbara A1 Tilch, Erik A1 Lee, Heekyoung A1 Horsch, Marion A1 Czamara, Darina A1 Karbalai, Nazanin A1 von Toerne, Christine A1 Waldenberger, Melanie A1 Gieger, Christian A1 Lichtner, Peter A1 Claussnitzer, Melina A1 Naumann, Ronald A1 Müller-Myhsok, Bertram A1 Torres, Miguel A1 Garrett, Lillian A1 Rozman, Jan A1 Klingenspor, Martin A1 Gailus-Durner, Valérie A1 Fuchs, Helmut A1 Hrabě de Angelis, Martin A1 Beckers, Johannes A1 Hölter, Sabine M. A1 Meitinger, Thomas A1 Hauck, Stefanie M. A1 Laumen, Helmut A1 Wurst, Wolfgang A1 Casares, Fernando A1 Gómez-Skarmeta, Jose Luis A1 Winkelmann, Juliane T1 Restless Legs Syndrome-associated intronic common variant in Meis1 alters enhancer function in the developing telencephalon JF Genome Research JO Genome Research YR 2014 FD April 01 VO 24 IS 4 SP 592 OP 603 DO 10.1101/gr.166751.113 UL http://genome.cshlp.org/content/24/4/592.abstract AB Genome-wide association studies (GWAS) identified the MEIS1 locus for Restless Legs Syndrome (RLS), but causal single nucleotide polymorphisms (SNPs) and their functional relevance remain unknown. This locus contains a large number of highly conserved noncoding regions (HCNRs) potentially functioning as cis-regulatory modules. We analyzed these HCNRs for allele-dependent enhancer activity in zebrafish and mice and found that the risk allele of the lead SNP rs12469063 reduces enhancer activity in the Meis1 expression domain of the murine embryonic ganglionic eminences (GE). CREB1 binds this enhancer and rs12469063 affects its binding in vitro. In addition, MEIS1 target genes suggest a role in the specification of neuronal progenitors in the GE, and heterozygous Meis1-deficient mice exhibit hyperactivity, resembling the RLS phenotype. Thus, in vivo and in vitro analysis of a common SNP with small effect size showed allele-dependent function in the prospective basal ganglia representing the first neurodevelopmental region implicated in RLS.