RT Journal A1 Monier, Adam A1 Pagarete, António A1 de Vargas, Colomban A1 Allen, Michael J. A1 Read, Betsy A1 Claverie, Jean-Michel A1 Ogata, Hiroyuki T1 Horizontal gene transfer of an entire metabolic pathway between a eukaryotic alga and its DNA virus JF Genome Research JO Genome Research YR 2009 FD August 01 VO 19 IS 8 SP 1441 OP 1449 DO 10.1101/gr.091686.109 UL http://genome.cshlp.org/content/19/8/1441.abstract AB Interactions between viruses and phytoplankton, the main primary producers in the oceans, affect global biogeochemical cycles and climate. Recent studies are increasingly revealing possible cases of gene transfers between cyanobacteria and phages, which might have played significant roles in the evolution of cyanobacteria/phage systems. However, little has been documented about the occurrence of horizontal gene transfer in eukaryotic phytoplankton/virus systems. Here we report phylogenetic evidence for the transfer of seven genes involved in the sphingolipid biosynthesis pathway between the cosmopolitan eukaryotic microalga Emiliania huxleyi and its large DNA virus EhV. PCR assays indicate that these genes are prevalent in E. huxleyi and EhV strains isolated from different geographic locations. Patterns of protein and gene sequence conservation support that these genes are functional in both E. huxleyi and EhV. This is the first clear case of horizontal gene transfer of multiple functionally linked enzymes in a eukaryotic phytoplankton–virus system. We examine arguments for the possible direction of the gene transfer. The virus-to-host direction suggests the existence of ancient viruses that controlled the complex metabolic pathway in order to infect primitive eukaryotic cells. In contrast, the host-to-virus direction suggests that the serial acquisition of genes involved in the same metabolic pathway might have been a strategy for the ancestor of EhVs to stay ahead of their closest relatives in the great evolutionary race for survival.