TY - JOUR A1 - Ling, King-Hwa A1 - Rajandream, Marie-Adele A1 - Rivailler, Pierre A1 - Ivens, Alasdair A1 - Yap, Soon-Joo A1 - Madeira, Alda M.B.N. A1 - Mungall, Karen A1 - Billington, Karen A1 - Yee, Wai-Yan A1 - Bankier, Alan T. A1 - Carroll, Fionnadh A1 - Durham, Alan M. A1 - Peters, Nicholas A1 - Loo, Shu-San A1 - Mat Isa, Mohd Noor A1 - Novaes, Jeniffer A1 - Quail, Michael A1 - Rosli, Rozita A1 - Nor Shamsudin, Mariana A1 - Sobreira, Tiago J.P. A1 - Tivey, Adrian R. A1 - Wai, Siew-Fun A1 - White, Sarah A1 - Wu, Xikun A1 - Kerhornou, Arnaud A1 - Blake, Damer A1 - Mohamed, Rahmah A1 - Shirley, Martin A1 - Gruber, Arthur A1 - Berriman, Matthew A1 - Tomley, Fiona A1 - Dear, Paul H. A1 - Wan, Kiew-Lian T1 - Sequencing and analysis of chromosome 1 of Eimeria tenella reveals a unique segmental organization Y1 - 2007/03/01 JF - Genome Research JO - Genome Research SP - 311 EP - 319 DO - 10.1101/gr.5823007 VL - 17 IS - 3 UR - http://genome.cshlp.org/content/17/3/311.abstract N2 - Eimeria tenella is an intracellular protozoan parasite that infects the intestinal tracts of domestic fowl and causes coccidiosis, a serious and sometimes lethal enteritis. Eimeria falls in the same phylum (Apicomplexa) as several human and animal parasites such as Cryptosporidium, Toxoplasma, and the malaria parasite, Plasmodium. Here we report the sequencing and analysis of the first chromosome of E. tenella, a chromosome believed to carry loci associated with drug resistance and known to differ between virulent and attenuated strains of the parasite. The chromosome—which appears to be representative of the genome—is gene-dense and rich in simple-sequence repeats, many of which appear to give rise to repetitive amino acid tracts in the predicted proteins. Most striking is the segmentation of the chromosome into repeat-rich regions peppered with transposon-like elements and telomere-like repeats, alternating with repeat-free regions. Predicted genes differ in character between the two types of segment, and the repeat-rich regions appear to be associated with strain-to-strain variation. ER -