TY - JOUR A1 - Khan, Asis A1 - Böhme, Ulrike A1 - Kelly, Krystyna A. A1 - Adlem, Ellen A1 - Brooks, Karen A1 - Simmonds, Mark A1 - Mungall, Karen A1 - Quail, Michael A. A1 - Arrowsmith, Claire A1 - Chillingworth, Tracey A1 - Churcher, Carol A1 - Harris, David A1 - Collins, Matthew A1 - Fosker, Nigel A1 - Fraser, Audrey A1 - Hance, Zahra A1 - Jagels, Kay A1 - Moule, Sharon A1 - Murphy, Lee A1 - O'Neil, Susan A1 - Rajandream, Marie-Adele A1 - Saunders, David A1 - Seeger, Kathy A1 - Whitehead, Sally A1 - Mayr, Thomas A1 - Xuan, Xuenan A1 - Watanabe, Junichi A1 - Suzuki, Yutaka A1 - Wakaguri, Hiroyuki A1 - Sugano, Sumio A1 - Sugimoto, Chihiro A1 - Paulsen, Ian A1 - Mackey, Aaron J. A1 - Roos, David S. A1 - Hall, Neil A1 - Berriman, Matthew A1 - Barrell, Bart A1 - Sibley, L. David A1 - Ajioka, James W. T1 - Common inheritance of chromosome Ia associated with clonal expansion of Toxoplasma gondii Y1 - 2006/09/01 JF - Genome Research JO - Genome Research SP - 1119 EP - 1125 DO - 10.1101/gr.5318106 VL - 16 IS - 9 UR - http://genome.cshlp.org/content/16/9/1119.abstract N2 - Toxoplasma gondii is a globally distributed protozoan parasite that can infect virtually all warm-blooded animals and humans. Despite the existence of a sexual phase in the life cycle, T. gondii has an unusual population structure dominated by three clonal lineages that predominate in North America and Europe, (Types I, II, and III). These lineages were founded by common ancestors ~10,000 yr ago. The recent origin and widespread distribution of the clonal lineages is attributed to the circumvention of the sexual cycle by a new mode of transmission—asexual transmission between intermediate hosts. Asexual transmission appears to be multigenic and although the specific genes mediating this trait are unknown, it is predicted that all members of the clonal lineages should share the same alleles. Genetic mapping studies suggested that chromosome Ia was unusually monomorphic compared with the rest of the genome. To investigate this further, we sequenced chromosome Ia and chromosome Ib in the Type I strain, RH, and the Type II strain, ME49. Comparative genome analyses of the two chromosomal sequences revealed that the same copy of chromosome Ia was inherited in each lineage, whereas chromosome Ib maintained the same high frequency of between-strain polymorphism as the rest of the genome. Sampling of chromosome Ia sequence in seven additional representative strains from the three clonal lineages supports a monomorphic inheritance, which is unique within the genome. Taken together, our observations implicate a specific combination of alleles on chromosome Ia in the recent origin and widespread success of the clonal lineages of T. gondii. ER -