TY  - JOUR
A1  - Krzywinski, Martin
A1  - Wallis, John
A1  - Gösele, Claudia
A1  - Bosdet, Ian
A1  - Chiu, Readman
A1  - Graves, Tina
A1  - Hummel, Oliver
A1  - Layman, Dan
A1  - Mathewson, Carrie
A1  - Wye, Natasja
A1  - Zhu, Baoli
A1  - Albracht, Derek
A1  - Asano, Jennifer
A1  - Barber, Sarah
A1  - Brown-John, Mabel
A1  - Chan, Susanna
A1  - Chand, Steve
A1  - Cloutier, Alison
A1  - Davito, Jonathon
A1  - Fjell, Chris
A1  - Gaige, Tony
A1  - Ganten, Detlev
A1  - Girn, Noreen
A1  - Guggenheimer, Kurtis
A1  - Himmelbauer, Heinz
A1  - Kreitler, Thomas
A1  - Leach, Stephen
A1  - Lee, Darlene
A1  - Lehrach, Hans
A1  - Mayo, Michael
A1  - Mead, Kelly
A1  - Olson, Teika
A1  - Pandoh, Pawan
A1  - Prabhu, Anna-Liisa
A1  - Shin, Heesun
A1  - Tänzer, Simone
A1  - Thompson, Jason
A1  - Tsai, Miranda
A1  - Walker, Jason
A1  - Yang, George
A1  - Sekhon, Mandeep
A1  - Hillier, LaDeana
A1  - Zimdahl, Heike
A1  - Marziali, Andre
A1  - Osoegawa, Kazutoyo
A1  - Zhao, Shaying
A1  - Siddiqui, Asim
A1  - de Jong, Pieter J.
A1  - Warren, Wes
A1  - Mardis, Elaine
A1  - McPherson, John D.
A1  - Wilson, Richard
A1  - Hübner, Norbert
A1  - Jones, Steven
A1  - Marra, Marco
A1  - Schein, Jacqueline
T1  - Integrated and Sequence-Ordered BAC- and YAC-Based Physical Maps for the Rat Genome
Y1  - 2004/04/01 
JF  - Genome Research 
JO  - Genome Research 
SP  - 766 
EP  - 779 
DO  - 10.1101/gr.2336604 
VL  - 14 
IS  - 4 
UR  - http://genome.cshlp.org/content/14/4/766.abstract 
N2  - As part of the effort to sequence the genome of Rattus norvegicus, we constructed a physical map comprised of fingerprinted bacterial artificial chromosome (BAC) clones from the CHORI-230 BAC library. These BAC clones provide ∼13-fold redundant coverage of the genome and have been assembled into 376 fingerprint contigs. A yeast artificial chromosome (YAC) map was also constructed and aligned with the BAC map via fingerprinted BAC and P1 artificial chromosome clones (PACs) sharing interspersed repetitive sequence markers with the YAC-based physical map. We have annotated 95% of the fingerprint map clones in contigs with coordinates on the version 3.1 rat genome sequence assembly, using BAC-end sequences and in silico mapping methods. These coordinates have allowed anchoring 358 of the 376 fingerprint map contigs onto the sequence assembly. Of these, 324 contigs are anchored to rat genome sequences localized to chromosomes, and 34 contigs are anchored to unlocalized portions of the rat sequence assembly. The remaining 18 contigs, containing 54 clones, still require placement. The fingerprint map is a high-resolution integrative data resource that provides genome-ordered associations among BAC, YAC, and PAC clones and the assembled sequence of the rat genome. 
ER  -