TY - JOUR A1 - Wienholds, Erno A1 - van Eeden, Freek A1 - Kosters, Marit A1 - Mudde, Josine A1 - Plasterk, Ronald H.A. A1 - Cuppen, Edwin T1 - Efficient Target-Selected Mutagenesis in Zebrafish Y1 - 2003/12/01 JF - Genome Research JO - Genome Research SP - 2700 EP - 2707 DO - 10.1101/gr.1725103 VL - 13 IS - 12 UR - http://genome.cshlp.org/content/13/12/2700.abstract N2 - One of the most powerful methods available to assign function to a gene is to inactivate or knockout the gene. Recently, we described the first target-selected knockout in zebrafish. Here, we report on the further improvements of this procedure, resulting in a highly efficient and easy method to do target-selected mutagenesis in zebrafish. A library of 4608 ENU-mutagenized F1 animals was generated and kept as a living stock. The DNA of these animals was screened for mutations in 16 genes by use of CEL-I-mediated heteroduplex cleavage (TILLING) and subsequent resequencing. In total, 255 mutations were identified, of which 14 resulted in a premature stop codon, 7 in a splice donor/acceptor site mutation, and 119 in an amino acid change. By this method, we potentially knocked out 13 different genes in a few months time. Furthermore, we show that TILLING can be used to detect the full spectrum of ENU-induced mutations in a vertebrate genome with the presence of many naturally occurring polymorphisms. ER -