RT Journal A1 Hall, Diana A1 Wijsman, Ellen M. A1 Roos, J. Louw A1 Gogos, Joseph A. A1 Karayiorgou, Maria T1 Extended Intermarker Linkage Disequilibrium in the Afrikaners JF Genome Research JO Genome Research YR 2002 FD June 01 VO 12 IS 6 SP 956 OP 961 DO 10.1101/gr.136202 UL http://genome.cshlp.org/content/12/6/956.abstract AB In this study we conducted an investigation of the background level of linkage disequilibrium (LD) in the Afrikaner population to evaluate the appropriateness of this genetic isolate for mapping complex traits. We analyzed intermarker LD in 62 nuclear families using microsatellite markers covering extended chromosomal regions. The markers were selected to allow the first direct comparison of long-range LD in the Afrikaners to LD in other demographic groups. Using several statistical measures, we find significant evidence for LD in the Afrikaners extending remarkably over a 6-cM range. In contrast, LD decays significantly beyond 3-cM distances in the other founder and outbred populations examined. This study strongly supports the appropriateness of the Afrikaner population for genome-wide scans that exploit LD to map common, multigenic disorders.